Notes
Includes bibliographical references and index , Machine generated contents note: 1 Are the Eyes Homologous? 1 -- Jeremy C. Ahouse -- 1 Information and Knowledge Representation 17 -- 2 Automation of Protein Sequence Characterization and Its Application in Whole Proteome Analysis 19 -- Rolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Evgenia -- V. Kriventseva, and Nicola Mulder -- 3 Information Fusion and Metabolic Network Control 49 -- Andreas Freier, Ralf Hofestiidt, Matthias Lange, and Uwe Scholz -- II Gene Regulation: From Sequence to Networks 85 -- 4 Specificity of Protein-DNA Interactions 87 -- Gary D. Stormo -- 5 Genomics of Gene Regulation: The View from Escherichia coli 103 -- Julio Collado-Vides, Gabriel Moreno-Hagelsieb, Ernesto -- Perez-Rueda, Heladia Salgado, Araceli M. Huerta, Rosa Maria -- Gutierrez, David A. Rosenblueth, Andres Christen, Esperanza -- Benitez-Bell6n, Arturo Medrano-Soto, Socorro Gama-Castro, -- Alberto Santos-Zavaleta, Cesar Bonavides-Martinez, Edgar -- Diaz-Peredo, Fabiola Sdnchez-Solano, and Dulce Maria Milldn -- 6 Discovery of DNA Regulatory Motifs 129 -- Abigail Manson McGuire and George M. Church -- 7 Gene Networks Description and Modeling in the GeneNet -- System 149 -- Nikolay A. Kolchanov, Elena A. Ananko, Vitali A. Likhoshvai, -- Olga A. Podkolodnaya, Elena V. Ignatieva, Alexander V. -- Ratushny, and Yuri G. Matushkin -- 8 Regulation of Cellular States in Mammalian Cells from a -- Genomewide View 181 -- Sui Huang -- III Postgenomic Approaches 221 -- 9 Predicting Protein Function and Networks on a -- Genomewide Scale 223 -- Edward M. Marcotte -- 10 Metabolic Pathways 251 -- Steffen Schmidt and Thomas Dandekar -- 11 Toward Computer Simulation of the Whole Cell 273 -- Masaru Tomita.
